| Previous changeset 64:30847b2e105d (2020-11-10) Next changeset 66:bc1977b1f7b5 (2020-11-11) |
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Commit message:
Uploaded |
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modified:
toolfactory/rgToolFactory2.py toolfactory/test-data/toolfactory_pyrevpos_tgz_sample |
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added:
toolfactory/test-data/pyrevpos.python |
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| diff -r 30847b2e105d -r ed1ecd161295 toolfactory/rgToolFactory2.py --- a/toolfactory/rgToolFactory2.py Tue Nov 10 03:24:28 2020 +0000 +++ b/toolfactory/rgToolFactory2.py Tue Nov 10 23:53:32 2020 +0000 |
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| @@ -843,7 +843,6 @@ p = subprocess.run( cll, shell=False, cwd=self.tooloutdir, stderr=dummy, stdout=dummy, ) - dummy.close() # throw all the log away as it will be rerun after outputs are generated else: cll = ["planemo", "test", "--galaxy_root", self.args.galaxy_root, @@ -927,6 +926,8 @@ dest = os.path.join(self.repdir, ofn) src = os.path.join(self.tooloutdir, entry.name) shutil.copyfile(src, dest) + if entry.name.startswith('tool_test_output'): + os.unlink(src) def main(): |
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| diff -r 30847b2e105d -r ed1ecd161295 toolfactory/test-data/pyrevpos.python --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/toolfactory/test-data/pyrevpos.python Tue Nov 10 23:53:32 2020 +0000 |
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| @@ -0,0 +1,13 @@ +# reverse order of text by row +import sys +inp = sys.argv[1] +outp = sys.argv[2] +i = open(inp,'r').readlines() +o = open(outp,'w') +for row in i: + rs = row.rstrip() + rs = list(rs) + rs.reverse() + o.write(''.join(rs)) +o.close() + |
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| diff -r 30847b2e105d -r ed1ecd161295 toolfactory/test-data/toolfactory_pyrevpos_tgz_sample |
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| Binary file toolfactory/test-data/toolfactory_pyrevpos_tgz_sample has changed |