| Previous changeset 27:4e6ac737ba17 (2014-05-15) Next changeset 29:420d0508dcd6 (2014-05-15) |
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Commit message:
add blast2html.xml config setting |
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added:
blast2html.xml |
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| diff -r 4e6ac737ba17 -r 8a8c0c71b5d1 blast2html.xml --- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/blast2html.xml Thu May 15 16:46:30 2014 +0200 |
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| @@ -0,0 +1,35 @@ +<tool id="blast2html" name="blast2html" version="0.0.1"> + + <description>Convert BLAST XML to HTML</description> + + <requirements> + <requirement type="python-module">jinja2</requirement> + <requirement type="python-module">lxml</requirement> + </requirements> + + <command interpreter="python">blast2html.py -i "${input}" -o "${output}"</command> + + <inputs> + <param format="blast" name="input" type="data" label="Source file"/> + </inputs> + + <outputs> + <data format="html" name="output" /> + </outputs> + + <tests> + <test> + <param name="input" value="blast-view_test1_in.xml"/> + <output name="out_file1" file="blast-view_test1_out.html"/> + </test> + <test> + <param name="input" value="blast-view_test2_in.xml"/> + <output name="out_file1" file="blast-view_test2_out.html"/> + </test> + </tests> + + <help> + This tool converts the default BLAST XML result into a HTML document + </help> + +</tool> |