Repository 'blast2html'
hg clone https://toolshed.g2.bx.psu.edu/repos/jankanis/blast2html

Changeset 97:8b3c5d334a84 (2014-06-30)
Previous changeset 96:02b795b784e1 (2014-06-30) Next changeset 98:e780606b7c25 (2014-06-30)
Commit message:
update tests
modified:
test-data/blast xml example1.html
test-data/blast xml example3.html
test-data/blast xml example4.html
b
diff -r 02b795b784e1 -r 8b3c5d334a84 test-data/blast xml example1.html
--- a/test-data/blast xml example1.html Mon Jun 30 17:31:10 2014 +0200
+++ b/test-data/blast xml example1.html Mon Jun 30 17:31:26 2014 +0200
b
b'@@ -1850,7 +1850,7 @@\n                   <td>100%</td>\n                   <td>0.0007913</td>\n                   <td>100%</td>\n-                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804730?report=genbank&amp;log$=nuclalign">3J5K_A</a></td>\n+                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5K_A?report=genbank&amp;log$=nuclalign">3J5K_A</a></td>\n                 </tr>\n                 <tr>\n                   <td><div><a href="#hit1-2"\n@@ -1863,7 +1863,7 @@\n                   <td>100%</td>\n                   <td>0.0007913</td>\n                   <td>100%</td>\n-                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804675?report=genbank&amp;log$=nuclalign">3J5I_A</a></td>\n+                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5I_A?report=genbank&amp;log$=nuclalign">3J5I_A</a></td>\n                 </tr>\n                 <tr>\n                   <td><div><a href="#hit1-3"\n@@ -1876,7 +1876,7 @@\n                   <td>100%</td>\n                   <td>0.0007913</td>\n                   <td>100%</td>\n-                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804619?report=genbank&amp;log$=nuclalign">3J5G_A</a></td>\n+                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5G_A?report=genbank&amp;log$=nuclalign">3J5G_A</a></td>\n                 </tr>\n                 <tr>\n                   <td><div><a href="#hit1-4"\n@@ -1889,7 +1889,7 @@\n                   <td>100%</td>\n                   <td>0.0007913</td>\n                   <td>100%</td>\n-                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804563?report=genbank&amp;log$=nuclalign">3J5E_A</a></td>\n+                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5E_A?report=genbank&amp;log$=nuclalign">3J5E_A</a></td>\n                 </tr>\n                 <tr>\n                   <td><div><a href="#hit1-5"\n@@ -1902,7 +1902,7 @@\n                   <td>100%</td>\n                   <td>0.0007913</td>\n                   <td>100%</td>\n-                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804507?report=genbank&amp;log$=nuclalign">3J5C_A</a></td>\n+                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5C_A?report=genbank&amp;log$=nuclalign">3J5C_A</a></td>\n                 </tr>\n                 <tr>\n                   <td><div><a href="#hit1-6"\n@@ -1915,7 +1915,7 @@\n                   <td>100%</td>\n                   <td>0.0007913</td>\n                   <td>100%</td>\n-                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804451?report=genbank&amp;log$=nuclalign">3J5A_A</a></td>\n+                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/3J5A_A?report=genbank&amp;log$=nuclalign">3J5A_A</a></td>\n                 </tr>\n                 <tr>\n                   <td><div><a href="#hit1-7"\n@@ -1928,7 +1928,7 @@\n                   <td>100%</td>\n                   <td>0.0007913</td>\n                   <td>100%</td>\n-                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804395?report=genbank&amp;log$=nuclalign">3J58_A</a></td>\n+                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/3J58_A?report=genbank&amp;log$=nuclalign">3J58_A</a></td>\n                 </tr>\n                 <tr>\n                   <td><div><a href="#hit1-8"\n@@ -1941,7 +1941,7 @@\n                   <td>100%</td>\n                   <td>0.0007913</td>\n                   <td>100%</td>\n-                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/557804339?report=genbank&amp;log$=nuclalign">3J56_A</a></td>\n+                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/3J56_A?report=genbank&amp;log$=nuclalign">3J56_A</a></td>\n                 </tr>\n                 <tr>\n                   <td><div><a href="#hit1-9"\n@@ -1954,7 +1954,7 @@\n                   <td>100%</td>\n                   <td>0.0007913</td>\n                   <td>100%</td>\n-                  <td><a href="http://www.ncbi.n'..b'ref="http://www.ncbi.nlm.nih.gov/nucleotide/396639330?report=graph&amp;log$=nuclalign&amp;from=2474&amp;to=2481">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n@@ -13120,14 +12436,13 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description1-99">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/393715375?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/393715375?report=graph&amp;log$=nuclalign">Graphics</a>\n+                  <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/4AQX_C?report=genbank&amp;log$=nuclalign">Gene Bank</a>\n                 </div>\n \n                 <div class=title>\n                   <p class=hittitle>Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Magnesium</p>\n                   <p class=titleinfo>\n-                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/393715375?report=genbank&amp;log$=nuclalign">pdb|4AQX|C</a>\n+                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/4AQX_C?report=genbank&amp;log$=nuclalign">gi|393715375|pdb|4AQX|C</a>\n                     <span class=b>Length:</span> 14\n                     <span class=b>Number of Matches:</span> 1\n                   </p>\n@@ -13137,8 +12452,6 @@\n                 <div class=hotspot id=hotspot1-99-1>\n                   <p class=range>\n                     <span class=range>Range 1: 7 to 14</span>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/393715375?report=genbank&amp;log$=nuclalign&amp;from=7&amp;to=14">GenBank</a>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/393715375?report=graph&amp;log$=nuclalign&amp;from=7&amp;to=14">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n@@ -13165,14 +12478,13 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description1-100">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/393715371?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/393715371?report=graph&amp;log$=nuclalign">Graphics</a>\n+                  <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/4AQU_C?report=genbank&amp;log$=nuclalign">Gene Bank</a>\n                 </div>\n \n                 <div class=title>\n                   <p class=hittitle>Chain C, Crystal Structure Of I-Crei Complexed With Its Target Methylated At Position Plus 2 (In The B Strand) In The Presence Of Calcium</p>\n                   <p class=titleinfo>\n-                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/393715371?report=genbank&amp;log$=nuclalign">pdb|4AQU|C</a>\n+                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/4AQU_C?report=genbank&amp;log$=nuclalign">gi|393715371|pdb|4AQU|C</a>\n                     <span class=b>Length:</span> 24\n                     <span class=b>Number of Matches:</span> 1\n                   </p>\n@@ -13182,8 +12494,6 @@\n                 <div class=hotspot id=hotspot1-100-1>\n                   <p class=range>\n                     <span class=range>Range 1: 7 to 14</span>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/393715371?report=genbank&amp;log$=nuclalign&amp;from=7&amp;to=14">GenBank</a>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/393715371?report=graph&amp;log$=nuclalign&amp;from=7&amp;to=14">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n'
b
diff -r 02b795b784e1 -r 8b3c5d334a84 test-data/blast xml example3.html
--- a/test-data/blast xml example3.html Mon Jun 30 17:31:10 2014 +0200
+++ b/test-data/blast xml example3.html Mon Jun 30 17:31:26 2014 +0200
b
b'@@ -811,8 +811,7 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description3-1">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=graph&amp;log$=nuclalign">Graphics</a>\n+                  <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">Gene Bank</a>\n                 </div>\n \n                 <div class=title>\n@@ -828,8 +827,6 @@\n                 <div class=hotspot id=hotspot3-1-1>\n                   <p class=range>\n                     <span class=range>Range 1: 200 to 219</span>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign&amp;from=200&amp;to=219">GenBank</a>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=graph&amp;log$=nuclalign&amp;from=200&amp;to=219">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n@@ -1050,8 +1047,7 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description6-1">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=graph&amp;log$=nuclalign">Graphics</a>\n+                  <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign">Gene Bank</a>\n                 </div>\n \n                 <div class=title>\n@@ -1067,8 +1063,6 @@\n                 <div class=hotspot id=hotspot6-1-1>\n                   <p class=range>\n                     <span class=range>Range 1: 2119 to 2138</span>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=genbank&amp;log$=nuclalign&amp;from=2119&amp;to=2138">GenBank</a>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_6?report=graph&amp;log$=nuclalign&amp;from=2119&amp;to=2138">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n@@ -1525,8 +1519,7 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description18-1">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=graph&amp;log$=nuclalign">Graphics</a>\n+                  <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign">Gene Bank</a>\n                 </div>\n \n                 <div class=title>\n@@ -1542,8 +1535,6 @@\n                 <div class=hotspot id=hotspot18-1-1>\n                   <p class=range>\n                     <span class=range>Range 1: 2 to 18</span>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=genbank&amp;log$=nuclalign&amp;from=2&amp;to=18">GenBank</a>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_2?report=graph&amp;log$=nuclalign&amp;from=2&amp;to=18">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n@@ -1712,8 +1703,7 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description19-1">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_3?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subje'..b'www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign&amp;from=1541&amp;to=1565">GenBank</a>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=graph&amp;log$=nuclalign&amp;from=1541&amp;to=1565">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n@@ -2943,8 +2925,7 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description48-1">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=graph&amp;log$=nuclalign">Graphics</a>\n+                  <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Gene Bank</a>\n                 </div>\n \n                 <div class=title>\n@@ -2960,8 +2941,6 @@\n                 <div class=hotspot id=hotspot48-1-1>\n                   <p class=range>\n                     <span class=range>Range 1: 2344 to 2368</span>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign&amp;from=2344&amp;to=2368">GenBank</a>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=graph&amp;log$=nuclalign&amp;from=2344&amp;to=2368">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n@@ -3287,8 +3266,7 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description55-1">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=graph&amp;log$=nuclalign">Graphics</a>\n+                  <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign">Gene Bank</a>\n                 </div>\n \n                 <div class=title>\n@@ -3304,8 +3282,6 @@\n                 <div class=hotspot id=hotspot55-1-1>\n                   <p class=range>\n                     <span class=range>Range 1: 1516 to 1589</span>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=genbank&amp;log$=nuclalign&amp;from=1516&amp;to=1589">GenBank</a>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_7?report=graph&amp;log$=nuclalign&amp;from=1516&amp;to=1589">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n@@ -3478,8 +3454,7 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description56-1">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=graph&amp;log$=nuclalign">Graphics</a>\n+                  <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign">Gene Bank</a>\n                 </div>\n \n                 <div class=title>\n@@ -3495,8 +3470,6 @@\n                 <div class=hotspot id=hotspot56-1-1>\n                   <p class=range>\n                     <span class=range>Range 1: 2319 to 2392</span>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=genbank&amp;log$=nuclalign&amp;from=2319&amp;to=2392">GenBank</a>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/Subject_8?report=graph&amp;log$=nuclalign&amp;from=2319&amp;to=2392">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n'
b
diff -r 02b795b784e1 -r 8b3c5d334a84 test-data/blast xml example4.html
--- a/test-data/blast xml example4.html Mon Jun 30 17:31:10 2014 +0200
+++ b/test-data/blast xml example4.html Mon Jun 30 17:31:26 2014 +0200
b
b'@@ -557,7 +557,7 @@\n                   <td>100%</td>\n                   <td>1.513e-07</td>\n                   <td>100%</td>\n-                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign">5</a></td>\n+                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/5?report=genbank&amp;log$=nuclalign">5</a></td>\n                 </tr>\n                 <tr>\n                   <td><div><a href="#hit1-2"\n@@ -570,7 +570,7 @@\n                   <td>100%</td>\n                   <td>1.513e-07</td>\n                   <td>100%</td>\n-                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign">2</a></td>\n+                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/2?report=genbank&amp;log$=nuclalign">2</a></td>\n                 </tr>\n               </table>\n \n@@ -587,14 +587,13 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description1-1">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=graph&amp;log$=nuclalign">Graphics</a>\n+                  <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/5?report=genbank&amp;log$=nuclalign">Gene Bank</a>\n                 </div>\n \n                 <div class=title>\n                   <p class=hittitle>AB209952.1|GenBank|insert_GTS-40-3-2|Glycine_max_transgenic_cp4epsps_gene_for_5-enol-pyruvylshikimate-3-phospate_synthase_class_2_precursor,_complete_cds|-9105899556052450000</p>\n                   <p class=titleinfo>\n-                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign">5</a>\n+                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/5?report=genbank&amp;log$=nuclalign">gnl|BL_ORD_ID|5</a>\n                     <span class=b>Length:</span> 2457\n                     <span class=b>Number of Matches:</span> 1\n                   </p>\n@@ -604,8 +603,6 @@\n                 <div class=hotspot id=hotspot1-1-1>\n                   <p class=range>\n                     <span class=range>Range 1: 2119 to 2138</span>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign&amp;from=2119&amp;to=2138">GenBank</a>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=graph&amp;log$=nuclalign&amp;from=2119&amp;to=2138">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n@@ -632,14 +629,13 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description1-2">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=graph&amp;log$=nuclalign">Graphics</a>\n+                  <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/2?report=genbank&amp;log$=nuclalign">Gene Bank</a>\n                 </div>\n \n                 <div class=title>\n                   <p class=hittitle>DJ437711|GenBank|insert_MIR604|Corn_Event_MIR604,_Left_Border_region|-5751164067366620000</p>\n                   <p class=titleinfo>\n-                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign">2</a>\n+                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/2?report=genbank&amp;log$=nuclalign">gnl|BL_ORD_ID|2</a>\n                     <span class=b>Length:</span> 323\n                     <span class=b>Num'..b'               <td>86%</td>\n-                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign">6</a></td>\n+                  <td><a href="http://www.ncbi.nlm.nih.gov/nucleotide/6?report=genbank&amp;log$=nuclalign">6</a></td>\n                 </tr>\n               </table>\n \n@@ -1506,14 +1485,13 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description7-1">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=graph&amp;log$=nuclalign">Graphics</a>\n+                  <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/7?report=genbank&amp;log$=nuclalign">Gene Bank</a>\n                 </div>\n \n                 <div class=title>\n                   <p class=hittitle>EUG|RIKILT|plasmid_pV-ZMBK07|plasmid_pV-ZMBK07|-2635190737607180000</p>\n                   <p class=titleinfo>\n-                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign">7</a>\n+                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/7?report=genbank&amp;log$=nuclalign">gnl|BL_ORD_ID|7</a>\n                     <span class=b>Length:</span> 4983\n                     <span class=b>Number of Matches:</span> 1\n                   </p>\n@@ -1523,8 +1501,6 @@\n                 <div class=hotspot id=hotspot7-1-1>\n                   <p class=range>\n                     <span class=range>Range 1: 2319 to 2392</span>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign&amp;from=2319&amp;to=2392">GenBank</a>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=graph&amp;log$=nuclalign&amp;from=2319&amp;to=2392">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n@@ -1554,14 +1530,13 @@\n \n                 <div class=linkheader>\n                   <div class=right><a href="#description7-2">Descriptions</a></div>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign">GenBank</a>\n-                  <a class=linkheader href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=graph&amp;log$=nuclalign">Graphics</a>\n+                  <a class="linkheader" href="http://www.ncbi.nlm.nih.gov/nucleotide/6?report=genbank&amp;log$=nuclalign">Gene Bank</a>\n                 </div>\n \n                 <div class=title>\n                   <p class=hittitle>AY326434|GenBank|insert_MON810|Synthetic_construct_truncated_CRYIA(b)_(cryIA(b))_gene,_partial_CDS|-2635190737607180000</p>\n                   <p class=titleinfo>\n-                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign">6</a>\n+                    <span class=b>Sequence ID:</span> <a href="http://www.ncbi.nlm.nih.gov/nucleotide/6?report=genbank&amp;log$=nuclalign">gnl|BL_ORD_ID|6</a>\n                     <span class=b>Length:</span> 4180\n                     <span class=b>Number of Matches:</span> 1\n                   </p>\n@@ -1571,8 +1546,6 @@\n                 <div class=hotspot id=hotspot7-2-1>\n                   <p class=range>\n                     <span class=range>Range 1: 1589 to 1516</span>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=genbank&amp;log$=nuclalign&amp;from=1589&amp;to=1516">GenBank</a>\n-                    <a class=range href="http://www.ncbi.nlm.nih.gov/nucleotide/BL_ORD_ID?report=graph&amp;log$=nuclalign&amp;from=1589&amp;to=1516">Graphics</a>\n                   </p>\n \n                   <table class=hotspotstable>\n'