| Previous changeset 7:55109291a355 (2019-12-18) Next changeset 9:385a965c6f87 (2024-06-17) |
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Commit message:
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/khmer commit 14ea2dc5ef36219c908ed64b256794711ce7b902" |
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modified:
abundance-dist-single.xml macros.xml |
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added:
test-data/test-abund-read-2.fq.gz |
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| diff -r 55109291a355 -r c018a72b523e abundance-dist-single.xml --- a/abundance-dist-single.xml Wed Dec 18 16:04:44 2019 -0500 +++ b/abundance-dist-single.xml Tue Mar 23 21:29:55 2021 +0000 |
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| @@ -1,4 +1,4 @@ -<tool id="khmer_abundance_distribution_single" name="khmer: Abundance Distribution (all-in-one)" version="@WRAPPER_VERSION@@TOOL_VERSION@"> +<tool id="khmer_abundance_distribution_single" name="khmer: Abundance Distribution (all-in-one)" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="@PROFILE@"> <description> Calculate abundance distribution of k-mers </description> @@ -55,7 +55,7 @@ </output> </test> <test> - <param name="input_sequence_filename" value="test-abund-read-2.fa" /> + <param name="input_sequence_filename" value="test-abund-read-2.fq.gz" /> <param name="type" value="specific" /> <param name="tablesize_specific" value="1e7" /> <param name="n_tables" value="2" /> |
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| diff -r 55109291a355 -r c018a72b523e macros.xml --- a/macros.xml Wed Dec 18 16:04:44 2019 -0500 +++ b/macros.xml Tue Mar 23 21:29:55 2021 +0000 |
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| @@ -1,9 +1,10 @@ <macros> - <token name="@WRAPPER_VERSION@">3.0.0a3</token> - <token name="@TOOL_VERSION@">+galaxy1</token> + <token name="@TOOL_VERSION@">3.0.0a3</token> + <token name="@VERSION_SUFFIX@">2</token> + <token name="@PROFILE@">20.01</token> <xml name="requirements"> <requirements> - <requirement type="package" version="@WRAPPER_VERSION@">khmer</requirement> + <requirement type="package" version="@TOOL_VERSION@">khmer</requirement> <yield/> </requirements> </xml> @@ -75,7 +76,7 @@ help="Put in order of precedence such as longest reads first." /> </xml> <xml name="input_sequence_filename"> - <param name="input_sequence_filename" type="data" format="fasta,fastq" + <param name="input_sequence_filename" type="data" format="fasta,fastq,fasta.gz,fastq.gz" label="Sequence in FASTA or FASTQ format" /> </xml> <xml name="input_countgraph_filename"> |
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| diff -r 55109291a355 -r c018a72b523e test-data/test-abund-read-2.fq.gz |
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| Binary file test-data/test-abund-read-2.fq.gz has changed |