Repository package_tophat_1_4_0
Name: package_tophat_1_4_0
Owner: devteam
Synopsis: Contains a tool dependency definition that downloads and compiles version 1.4.0 of tophat.
TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns
RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput short read
aligner Bowtie, and then analyzes the mapping results to identify splice junctions
between exons.
Development repository: https://github.com/galaxyproject/tools-devteam/tree/master/packages/package_tophat_1_4_0
Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/package_tophat_1_4_0/0fea0c8cc6cf
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/package_tophat_1_4_0
Type: tool_dependency_definition
Revision: 0:0fea0c8cc6cf
This revision can be installed: True
Times cloned / installed: 3489
Dependencies of this repository

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
tophat 1.4.0 package

Categories
Tool Dependency Packages - Repositories that contain third-party tool dependency package installation definitions