Galaxy |

Repository package_subread_1_4_6_p5

Name: package_subread_1_4_6_p5

Owner: iuc

Synopsis: Subread package: high-performance read alignment, quantification and mutation discovery

Detailed description:

The Subread package comprises a suite of software programs for processing next-gen sequencing read data including:
- Subread: an accurate and efficient aligner for mapping both genomic DNA-seq reads and RNA-seq reads (for the purpose of expression analysis).
- Subjunc: an RNA-seq aligner suitable for all purposes of RNA-seq analyses.
- featureCounts: a highly efficient and accurate read summarization program.
- exactSNP: a SNP caller that discovers SNPs by testing signals against local background noises.

Content homepage: http://subread.sourceforge.net/

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_subread_1_4_6_p5

Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/package_subread_1_4_6_p5/3645871df985

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/package_subread_1_4_6_p5

Type: tool_dependency_definition

Revision: 0:3645871df985

This revision can be installed: True

Times cloned / installed: 297