Repository package_bcftools_1_3
Name: package_bcftools_1_3
Owner: iuc
Synopsis: Contains a tool dependency definition that downloads and extracts version 1.3 of bcftools
BCFtools is a set of utilities that manipulate variant calls in the Variant Call Format (VCF) and its binary counterpart BCF. All commands work transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.

Most commands accept VCF, bgzipped VCF and BCF with filetype detected automatically even when streaming from a pipe. Indexed VCF and BCF will work in all situations. Un-indexed VCF and BCF and streams will work in most, but not all situations.
Content homepage: https://github.com/galaxyproject/tools-iuc/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/package_bcftools_1_3/43a9aebf3adb
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/package_bcftools_1_3
Type: tool_dependency_definition
Revision: 0:43a9aebf3adb
This revision can be installed: True
Times cloned / installed: 621
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
bcftools 1.3 package
zlib 1.2.8 package

Categories
Tool Dependency Packages - Repositories that contain third-party tool dependency package installation definitions
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA