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Repository consolidate_vcfs
Name: consolidate_vcfs
Owner: nml
Synopsis: Combines freebayes and mpileup files for use by vcf2snvalignment
The SNVPhyl (Single Nucleotide Variant PHYLogenomics) pipeline is a pipeline for identifying Single Nucleotide Variants (SNV) within a collection of microbial genomes and constructing a phylogenetic tree.
Content homepage: https://snvphyl.readthedocs.io/en/latest/
Development repository: https://github.com/phac-nml/snvphyl-galaxy
Link to this repository: https://toolshed.g2.bx.psu.edu/view/nml/consolidate_vcfs/4c249c0aebad
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/nml/consolidate_vcfs
Type: unrestricted
Revision: 1:4c249c0aebad
This revision can be installed: True
Times cloned / installed: 357

Contents of this repository

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Name Description Version Minimum Galaxy Version
combine freebayes and mpileup files for use by vcf2snvalignment 1.8.2+galaxy1 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis