Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository bwa
Name: bwa
Owner: devteam
Synopsis: Wrapper for bwa mem, aln, sampe, and samse
A collection of Galaxy bwa wrappers based on version 0.7.17.
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/bwa
Type: unrestricted
Revision: 11:546ada4a9f43
This revision can be installed: True
Times cloned / installed: 22667
Dependencies of this repository

Repository package_ncurses_5_9 revision 335ebf512407 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_bwa_0_7_12 revision 6af9b24ddeee owned by iuc

Name Version Type
bwa 0.7.12 package
samtools 1.2 package

Contents of this repository

Name Description Version Minimum Galaxy Version
- map medium and long reads (> 100 bp) against reference genome 0.7.12.1 16.01
- map short reads (< 100 bp) against reference genome 0.7.12.1 16.01

Categories
Next Gen Mappers - Tools for the analysis and handling of Next Gen sequencing data