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Repository msp_sr_bowtie
Name: msp_sr_bowtie
Owner: drosofff
Synopsis: bowtie wrapper tool to align small RNA sequencing reads
Bowtie wrapper tool to align small RNA sequencing reads. This tool belongs to the mississippi tool suite.
Content homepage: http://artbio.fr
Development repository: https://github.com/ARTbio/tools-artbio/tree/master/tools/msp_sr_bowtie
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/drosofff/msp_sr_bowtie/615d2550977f
Type: unrestricted
Revision: 4:615d2550977f
This revision can be installed: True
Times cloned / installed: 558
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_ncurses_5_9 revision 335ebf512407 owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_bowtie_1_1_2 revision a1c1a92e13a6 owned by iuc

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
bowtie 1.1.2 package
samtools 1.2 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
for FASTA small reads 1.1.2.1 any

Categories
Next Gen Mappers - Tools for the analysis and handling of Next Gen sequencing data
RNA - Utilities for RNA