Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository verify_map
Name: verify_map
Owner: nml
Synopsis: Checks the mapping quality of all BAM(s)
The SNVPhyl (Single Nucleotide Variant PHYLogenomics) pipeline is a pipeline for identifying Single Nucleotide Variants (SNV) within a collection of microbial genomes and constructing a phylogenetic tree.
Content homepage: https://snvphyl.readthedocs.io/en/latest/
Development repository: https://github.com/phac-nml/snvphyl-galaxy
Link to this repository: https://toolshed.g2.bx.psu.edu/view/nml/verify_map/80b7566e62ec
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/nml/verify_map
Type: unrestricted
Revision: 1:80b7566e62ec
This revision can be installed: True
Times cloned / installed: 360

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Checks the mapping quality of all BAM files generated in the core SNV pipeline. 1.8.2+galaxy1 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis