Repository snpeff_to_peptides
Name: snpeff_to_peptides
Owner: jjohnson
Synopsis: Creates a peptide fasta from a SnpEff VCF output and an Ensembl all_peps.fa
Creates a peptide fasta from a SnpEff VCF output and an Ensembl all_peps.fa that can be used in  a peptide search database for novel peptides.
Link to this repository: https://toolshed.g2.bx.psu.edu/view/jjohnson/snpeff_to_peptides/80eff5812b2a
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/jjohnson/snpeff_to_peptides
Type: unrestricted
Revision: 1:80eff5812b2a
This revision can be installed: True
Times cloned / installed: 538

Contents of this repository

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Name Description Version Minimum Galaxy Version
to create a Search DB fasta for variant SAP peptides 0.0.1 any

Categories
Proteomics - Tools enabling the study of proteins
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA