Repository package_khmer_2_0
Owner: iuc
Synopsis: In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more
khmer is a library and suite of command line tools for working with DNA
sequence. It is primarily aimed at short-read sequencing data such as that
produced by the Illumina platform. khmer takes a k-mer-centric approach to
sequence analysis, hence the name.

The official repository is at https://github.com/ged-lab/khmer
and you can read the docs online here: http://khmer.readthedocs.org/

There are two mailing lists dedicated to khmer, an announcements-only list
and a discussion list. To search their archives and sign-up for them, please
visit the following URLs:

Discussion http://lists.idyll.org/listinfo/khmer
Announcements http://lists.idyll.org/listinfo/khmer-announce
Content homepage: https://khmer.readthedocs.org/
Type: tool_dependency_definition
Revision: 2:c02c1e1abd48
This revision can be installed: True
Times cloned / installed: 729
Dependencies of this repository

Repository package_bz2file_0_98 revision 73382c8fa8f3 owned by iuc (prior install required)
Repository package_bz2file_0_98 revision 73382c8fa8f3 owned by iuc
Repository package_setuptools_19_0 revision cb689698d484 owned by iuc (prior install required)

Name Version Type
bz2file 0.98 package
khmer 2.0 package
screed 0.9 package
setuptools 19.0 package

Categories
Tool Dependency Packages - Repositories that contain third-party tool dependency package installation definitions