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Repository data_manager_gemini_database_downloader
Name: data_manager_gemini_database_downloader
Owner: iuc
Synopsis: GEMINI: a flexible framework for exploring genome variation
The intent of GEMINI (GEnome MINIing) is to provide a simple, flexible, and powerful framework for exploring genetic variation for
personal and medical genetics. GEMINI is unique in that it integrates genetic variation (from VCF files) with a wealth of genome
annotations into a unified database framework. Using this integrated database as the analysis framework, we aim to leverage the
expressive power of SQL for data analysis, while attempting to overcome the fundamental challenges associated with using databases for
very large (e.g. 1,000,000 variants times 1,000 samples yields one billion genotypes) datasets. In addition, by defining sample
relationships with a PED file, GEMINI allows one to explore and test for variants that meet specific inheritance models (e.g.,
recessive, dominant, etc.).
Content homepage: https://github.com/arq5x/gemini
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_gemini_database_downloader
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/data_manager_gemini_database_downloader/172815da3d41
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/data_manager_gemini_database_downloader
Type: unrestricted
Revision: 3:172815da3d41
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Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Download a new database 0.18.1 any

Data Managers
Name Version Data Tables
data_manager_gemini_download 0.0.1 gemini_databases

Categories
Data Managers - Utilities for Managing Galaxy's built-in data cache