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Repository vcfleftalign
Name: vcfleftalign
Owner: devteam
Synopsis: Left-align indels and complex variants in VCF dataset
Left-aligns variants in VCF dataset.  Window size is determined
dynamically according to the entropy of the regions flanking the indel.  These must
have entropy > 1 bit/bp, or be shorter than ~5kb.
Content homepage: https://github.com/ekg/vcflib
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tool_collections/vcflib/vcfleftalign
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/devteam/vcfleftalign/8e02d116b0f9
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/vcfleftalign
Type: unrestricted
Revision: 2:8e02d116b0f9
This revision can be installed: True
Times cloned / installed: 3097

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Left-align indels and complex variants in VCF dataset 1.0.0_rc1.0 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA