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Repository bcftools_mpileup
Name: bcftools_mpileup
Owner: iuc
Synopsis: Wrapper for bcftools application bcftools mpileup.
BCFtools are meant as a faster replacement for most of the perl VCFtools commands.
Content homepage: https://samtools.github.io/bcftools/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/bcftools
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/bcftools_mpileup/4e1d23e5c691
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bcftools_mpileup
Type: unrestricted
Revision: 3:4e1d23e5c691
This revision can be installed: True
Times cloned / installed: 1707

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Generate VCF or BCF containing genotype likelihoods for one or multiple alignment (BAM or CRAM) files 1.9+galaxy1 16.01

Categories
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA