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Repository cutadapt
Name: cutadapt
Owner: lparsons
Synopsis: Flexible tool to remove adapter sequences (and quality trim) high throughput sequencing reads (fasta/fastq).
Cutadapt finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads.

http://dx.doi.org/10.14806/ej.17.1.200
Content homepage: https://cutadapt.readthedocs.org/en/stable/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/cutadapt
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/lparsons/cutadapt/01d94df2e32a
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/lparsons/cutadapt
Type: unrestricted
Revision: 10:01d94df2e32a
This revision can be installed: True
Times cloned / installed: 13659
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_cython_0_20_1 revision bf766623094e owned by iuc (prior install required)

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
cutadapt 1.6 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Remove adapter sequences from Fastq/Fasta 1.6 any

Categories
Fasta Manipulation - Tools for manipulating fasta data
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis