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Repository idba_tran
Name: idba_tran
Owner: iuc
Synopsis: Wrapper for IDBA-TRAN
IDBA is a iterative De Bruijn Graph De Novo Assembler for Short Reads Sequencing data. The variants IDBA_UD, IDBA_TRAN, and IDBA_HYBRID allow to assemble sequencing data with Highly Uneven Sequencing Depth, transcriptome data, and to assemble with an available reference genome, respectively.
Content homepage: https://i.cs.hku.hk/~alse/hkubrg/projects/index.html
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/idba_ud
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/idba_tran/03de4e0f84c2
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/idba_tran
Type: unrestricted
Revision: 2:03de4e0f84c2
This revision can be installed: True
Times cloned / installed: 302

Contents of this repository

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Name Description Version Minimum Galaxy Version
Iterative de Bruijn Graph Assembler for transcriptome data 1.1.3+galaxy0 16.01

Categories
Assembly - Tools for working with assemblies