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Repository sed_fasta
Name: sed_fasta
Owner: brigidar
Synopsis: removes leading characters in fasta downloaded from ncbi to match genbank locus tag
Removes gi to gb characters and final pipe to match genbank locus tag.
example:
gi|536983252|gb|AVSC01000001.1| to AVSC01000001.1
Link to this repository: https://toolshed.g2.bx.psu.edu/view/brigidar/sed_fasta/04871c6242d2
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/brigidar/sed_fasta
Type: unrestricted
Revision: 1:04871c6242d2
This revision can be installed: True
Times cloned / installed: 270

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
remove leading characters fasta file 0.2 any

Categories
Text Manipulation - Tools for manipulating data