Galaxy |

Repository revision

Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository scanpy_run_tsne

Name: scanpy_run_tsne

Owner: ebi-gxa

Synopsis: Wrapper for the scanpy-scripts tool suite: Scanpy RunTSNE

Detailed description:

Scanpy is a scalable toolkit for analyzing single-cell gene expression data. It includes
preprocessing, visualization, clustering, pseudotime and trajectory inference and differential
expression testing. Scanpy-scripts provides a set of command-line wrapper scripts that are
composed from Scanpy API for easy execution of common analysis.

Content homepage: https://scanpy.readthedocs.io

Development repository: https://github.com/ebi-gene-expression-group/container-galaxy-sc-tertiary/tree/develop/tools/tertiary-analysis/scanpy

Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/ebi-gxa/scanpy_run_tsne/091e5d709ef7

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/ebi-gxa/scanpy_run_tsne

Type: unrestricted

Revision: 6:091e5d709ef7

This revision can be installed: True

Times cloned / installed: 1303