Repository revision
repository tip
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository trinityrnaseq
Name: trinityrnaseq
Owner: anmoljh
Synopsis: De novo assembly of RNA-Seq data Using Trinity version (r20140717)
Link to this repository: https://toolshed.g2.bx.psu.edu/view/anmoljh/trinityrnaseq/0a576a57a9eb
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/anmoljh/trinityrnaseq
Type: unrestricted
Revision: 10:0a576a57a9eb
This revision can be installed: True
Times cloned / installed: 727
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_ncurses_5_9 revision 93ce0192b9db owned by anmoljh (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_ncurses_5_9 revision 93ce0192b9db owned by anmoljh (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_bowtie_0_12_7 revision 9f9f38617a98 owned by devteam (prior install required)

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
bowtie 0.12.7 package
samtools 1.2 package
trinityrnaseq r20140717 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
De novo assembly of RNA-Seq data Using Trinity r20140717 any

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.