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Repository snippy
Name: snippy
Owner: iuc
Synopsis: Contains the snippy tool for characterising microbial snps
Snippy finds variants between a haploid reference genome and your NGS sequence reads. It will find both substitutions and insertions/deletions (indels).
Content homepage: https://github.com/tseemann/snippy
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/snippy
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/snippy/0aa87d97847f
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/snippy
Type: unrestricted
Revision: 5:0aa87d97847f
This revision can be installed: True
Times cloned / installed: 1447

Contents of this repository

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Name Description Version Minimum Galaxy Version
Combine multiple Snippy outputs into a core SNP alignment 4.4.3+galaxy0 16.01
Snippy finds SNPs between a haploid reference genome and your NGS sequence reads. 4.4.3+galaxy0 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis