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Repository revision
10 (2021-12-04)
1 (2018-07-15)
Select a revision to inspect and download versions of Galaxy utilities from this repository.
Repository
varscan_mpileup
Name:
varscan_mpileup
Owner:
iuc
Synopsis:
Wrapper for VarScan mpileup
Detailed description:
VarScan is a variant caller for high-throughput sequencing data.
Content homepage:
https://dkoboldt.github.io/varscan/
Development repository:
https://github.com/galaxyproject/iuc/tree/master/tools/varscan
Link to this repository revision:
https://toolshed.g2.bx.psu.edu/view/iuc/varscan_mpileup/0bc800d67a0e
Clone this repository:
hg clone
https://toolshed.g2.bx.psu.edu/repos/iuc/varscan_mpileup
Type:
unrestricted
Revision:
1:0bc800d67a0e
This revision can be installed:
True
Times cloned / installed:
776
Contents of this repository
Valid tools
- click the name to preview the tool and use the pop-up menu to inspect all metadata
Name
Description
Version
Minimum Galaxy Version
VarScan mpileup
View tool metadata
for variant detection
2.4.3.0
16.01
Categories
Variant Analysis
- Tools for single nucleotide polymorphism data such as WGA