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Repository data_manager_groot_database_downloader
Name: data_manager_groot_database_downloader
Owner: iuc
Synopsis: Download pre-clustered ARG database that are ready to be indexed
GROOT is a tool to type Antibiotic Resistance Genes (ARGs) in metagenomic samples (a.k.a. Resistome Profiling). It combines variation graph representation of gene sets with an LSH indexing scheme to allow for fast classification of metagenomic reads.
Content homepage: https://github.com/will-rowe/groot
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_groot_database_downloader
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/data_manager_groot_database_downloader/0c255951902a
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/data_manager_groot_database_downloader
Type: unrestricted
Revision: 1:0c255951902a
This revision can be installed: True
Times cloned / installed: 64

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Download pre-clustered ARG database that are ready to be indexed 1.1.2+galaxy1 22.05

Data Managers
Name Version Data Tables
groot_database_downloader 0.0.1 groot_database

Categories
Data Managers - Utilities for Managing Galaxy's built-in data cache