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Repository bctools_extract_alignment_ends
Name: bctools_extract_alignment_ends
Owner: iuc
Synopsis: Extract alignment ends tool from the bctools package
bctools is a set of tools for handling barcodes and UMIs in NGS data.

bctools can be used to merge PCR duplicates according to unique molecular barcodes (UMIs),
to extract barcodes from arbitrary positions relative to the read starts,
to clean up readthroughs into UMIs with paired-end sequencing and
handles binary barcodes as used with uvCLAP and FLASH.

License: Apache License 2.0
Content homepage: https://github.com/dmaticzka/bctools
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/bedtools
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/bctools_extract_alignment_ends/0e70f9058b02
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bctools_extract_alignment_ends
Type: unrestricted
Revision: 0:0e70f9058b02
This revision can be installed: True
Times cloned / installed: 648

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
from SAM or BAM 0.2.1 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Transcriptomics - Tools for use in the study of Transcriptomics.