Galaxy |

Repository cd_hit_dup

Name: cd_hit_dup

Owner: devteam

Synopsis: simple tool for removing duplicates from sequencing reads

Detailed description:

cd-hit-dup is a simple tool for removing duplicates from sequencing
reads, with optional step to detect and remove chimeric reads. A number of options
are provided to tune how the duplicates are removed.

Development repository: https://github.com/galaxyproject/tools-devteam/tree/master/tools/cd_hit_dup

Link to this repository: https://toolshed.g2.bx.psu.edu/view/devteam/cd_hit_dup/0fb894bd8eba

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/devteam/cd_hit_dup

Type: unrestricted

Revision: 1:0fb894bd8eba

This revision can be installed: True

Times cloned / installed: 2630

Tool dependencies - repository tools require handling of these dependencies
Name	Version	Type
cd-hit-auxtools	0.5-2012-03-07-fix-dan-gh-0.0.1	package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name	Description	Version	Minimum Galaxy Version
cd-hit-dup View tool metadata	remove duplicates and detect chimaeras in sequencing reads	0.0.1	any

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata

Name

Description

Version

Minimum Galaxy Version

View tool metadata

remove duplicates and detect chimaeras in sequencing reads

0.0.1

any