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Repository gtdb_to_taxdump
Name: gtdb_to_taxdump
Owner: iuc
Synopsis: Convert GTDB taxonomy to NCBI taxdump format
Convert GTDB taxonomy to NCBI taxdump format in 
order to use the GTDB taxonomy with software 
that requires a taxonomy in the taxdump 
format (eg., kraken2 or TaxonKit).
Content homepage: https://github.com/nick-youngblut/gtdb_to_taxdump
Development repository: https://github.com/nick-youngblut/gtdb_to_taxdump
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/gtdb_to_taxdump/102852801457
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/gtdb_to_taxdump
Type: unrestricted
Revision: 1:102852801457
This revision can be installed: True
Times cloned / installed: 43

Contents of this repository

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Name Description Version Minimum Galaxy Version
Map taxonomic classifications between the NCBI and GTDB taxonomies 0.1.9+galaxy0 21.05

Categories
Metagenomics - Tools enabling the study of metagenomes