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Repository seq_composition
Name: seq_composition
Owner: peterjc
Synopsis: Sequence composition
Counts the letters in given sequence files, returning a table listing them
with percentages. Suitable for use on assemblies or gene/protein sets.
Probably not suitable for raw NGS reads.
Content homepage: https://github.com/peterjc/pico_galaxy/tree/master/tools/seq_composition
Development repository: https://github.com/peterjc/pico_galaxy/tree/master/tools/seq_composition
Link to this repository: https://toolshed.g2.bx.psu.edu/view/peterjc/seq_composition/13be788233da
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/peterjc/seq_composition
Type: unrestricted
Revision: 4:13be788233da
This revision can be installed: True
Times cloned / installed: 473
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_numpy_1_9 revision 83d12e13dbbd owned by iuc (prior install required)
Repository package_atlas_3_10 revision 98c017ec230d owned by iuc (prior install required)
Repository package_python_2_7 revision f761bd14343e owned by iuc (prior install required)
Repository package_zlib_1_2_8 revision 411985b46ae8 owned by iuc (prior install required)
Repository package_readline_6_3 revision ca1a9400d4e1 owned by iuc (prior install required)
Repository package_bzlib_1_0 revision af4887e1f595 owned by iuc (prior install required)
Repository package_xz_5_0_5 revision 944f93d45594 owned by iuc (prior install required)
Repository package_sqlite_3_8_3 revision c8a5c11cc921 owned by iuc (prior install required)
Repository package_gdbm_1_11 revision ed2537bccffc owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 0efde9889efd owned by iuc (prior install required)
Repository package_ncurses_6_0 revision 0efde9889efd owned by iuc (prior install required)
Repository package_libtool_2_4 revision 7f67694b167c owned by iuc (prior install required)

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
biopython 1.67 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Count bases or amino-acids 0.0.5 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis