Repository revision
Select a revision to inspect and download versions of Galaxy utilities from this repository.

Repository stacks_refmap
Name: stacks_refmap
Owner: iuc
Synopsis: Stacks: reference map (from the Stacks tool suite)
Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform.
Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.

http://catchenlab.life.illinois.edu/stacks/
Content homepage: http://catchenlab.life.illinois.edu/stacks/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/stacks
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/stacks_refmap/14396ffcb253
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/stacks_refmap
Type: unrestricted
Revision: 7:14396ffcb253
This revision can be installed: True
Times cloned / installed: 826

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
the Stacks pipeline with a reference genome (ref_map.pl) 1.42.0 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis