Repository suite_metavisitor_2
Name: suite_metavisitor_2
Owner: artbio
Synopsis: Collection of mississippi tools for virus detection or discovery from (small) RNA sequence datasets
Collection of mississippi tools for virus detection or discovery from (small) RNA sequence datasets
Content homepage: http://artbio.fr
Development repository: https://github.com/ARTbio/tools-artbio/tree/master/suites/suite_metavisitor_2
Link to this repository: https://toolshed.g2.bx.psu.edu/view/artbio/suite_metavisitor_2/1570b18266be
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/artbio/suite_metavisitor_2
Type: repository_suite_definition
Revision: 0:1570b18266be
This revision can be installed: True
Times cloned / installed: 202
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository blast_datatypes revision 01b38f20197e owned by devteam
Repository package_blast_plus_2_5_0 revision 5dd2b68c7d04 owned by iuc
Repository blast_to_scaffold revision 7d96b28eec49 owned by artbio
Repository blast_unmatched revision fffdb903f2d1 owned by artbio
Repository cap3 revision d76a0d8a9eac owned by artbio
Repository cherry_pick_fasta revision e3aee4ba49c6 owned by artbio
Repository concatenate_multiple_datasets revision 55cf9d9defd1 owned by artbio
Repository fetch_fasta_from_ncbi revision c667d0ee39f5 owned by artbio
Repository oases revision f7dd852c8f4c owned by artbio
Repository sequence_format_converter revision f1d59113125a owned by artbio
Repository small_rna_maps revision 14adf24603b6 owned by artbio
Repository sr_bowtie revision 0281bb245635 owned by artbio
Repository yac_clipper revision f7947c5a18b8 owned by artbio
Repository data_manager_bowtie_index_builder revision cb157f55b4fd owned by iuc
Repository khmer_normalize_by_median revision bfd859f04a89 owned by iuc
Repository sra_tools revision 1790dcf3c32d owned by iuc
Repository trinity revision c9cfec002f71 owned by iuc
Repository vsearch revision b3c7199d8786 owned by iuc
Repository bowtie2 revision 017aba02828d owned by devteam
Repository data_manager_bowtie2_index_builder revision d1d5feb31804 owned by devteam
Repository data_manager_fetch_genome_dbkeys_all_fasta revision b1bc53e9bbc5 owned by devteam
Repository fasta_compute_length revision de2db1bdfbf8 owned by devteam
Repository fasta_filter_by_length revision e626b3ff9922 owned by devteam
Repository fastx_trimmer revision 547e8d00f11c owned by devteam
Repository regex_find_replace revision 209b7c5ee9d7 owned by galaxyp
Repository spades revision b7829778729f owned by nml

Categories
RNA - Utilities for RNA
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis