Repository pfamscan
Name: pfamscan
Owner: bgruening
Synopsis: Search a FASTA sequence against a library of Pfam HMM.
Search one or more sequences for matching Pfam domains. Depending on the user options, 
the script can also process the results such that overlaps between families belonging 
to the same clan are resolved and can predict active sites.
Content homepage: http://ftp.ebi.ac.uk/pub/databases/Pfam/Tools/
Development repository: https://github.com/bgruening/galaxytools/tree/master/tools/pfamscan
Link to this repository: https://toolshed.g2.bx.psu.edu/view/bgruening/pfamscan/15cff34c2005
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/pfamscan
Type: unrestricted
Revision: 0:15cff34c2005
This revision can be installed: True
Times cloned / installed: 55

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
search a FASTA sequence against a library of Pfam HMM 1.6+galaxy0 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis