| HUMAnN is a pipeline for efficiently and accurately profiling the presence/absence and abundance of microbial pathways in a community from metagenomic or metatranscriptomic sequencing data (typically millions of short DNA/RNA reads). This process, referred to as functional profiling, aims to describe the metabolic potential of a microbial community and its members. More generally, functional profiling answers the question "What are the microbes in my community-of-interest doing (or capable of doing)?" |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/humann2
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| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| to profile presence/absence and abundance of microbial pathways and gene families | 0.9.9.0 | any | |