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Repository trim_galore
Name: trim_galore
Owner: bgruening
Synopsis: Trim Galore adaptive quality and adapter trimmer
Trim Galore! is a wrapper script that makes use of the publically available adapter trimming tool Cutadapt and FastQC for optional quality control once the trimming process has completed.
Content homepage: http://www.bioinformatics.babraham.ac.uk/projects/trim_galore/
Development repository: https://github.com/bgruening/galaxytools/tree/master/tools/trim_galore
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/bgruening/trim_galore/1bfc7254232e
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/trim_galore
Type: unrestricted
Revision: 9:1bfc7254232e
This revision can be installed: True
Times cloned / installed: 5899
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_cython_0_20_1 revision bf766623094e owned by iuc (prior install required)

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
cutadapt 1.8 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Quality and adapter trimmer of reads 0.4.2 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis