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Repository bbtools_bbduk
Name: bbtools_bbduk
Owner: iuc
Synopsis: BBTools: BBduk tool from the bbtools suite
BBTools is a suite of fast, multithreaded bioinformatics tools designed for analysis of DNA and RNA sequence data.
BBTools can handle common sequencing file formats such as fastq, fasta, sam, scarf, fasta+qual, compressed or raw,
with autodetection of quality encoding and interleaving. It is written in Java and works on any platform supporting
Java, including Linux, MacOS, and Microsoft Windows and Linux; there are no dependencies other than Java (version
7 or higher). Program descriptions and options are shown when running the shell scripts with no parameters.
Content homepage: https://jgi.doe.gov/data-and-tools/bbtools/
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/bbtools
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/bbtools_bbduk/1c427e24fb79
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bbtools_bbduk
Type: unrestricted
Revision: 6:1c427e24fb79
This revision can be installed: True
Times cloned / installed: 505

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
decontamination using kmers 39.06+galaxy1 22.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis