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Repository music_deconvolution
Name: music_deconvolution
Owner: bgruening
Synopsis: Wrapper for the MuSiC tool suite: MuSiC Deconvolution
MuSiC is a deconvolution method that utilizes cross-subject scRNA-seq to estimate cell type proportions in bulk RNA-seq data.
Content homepage: https://github.com/xuranw/MuSiC
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/music/
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/bgruening/music_deconvolution/1c4cf4b7debe
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/music_deconvolution
Type: unrestricted
Revision: 2:1c4cf4b7debe
This revision can be installed: True
Times cloned / installed: 287

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
estimate cell type proportions in bulk RNA-seq data 0.1.1+galaxy1 20.09

Categories
Transcriptomics - Tools for use in the study of Transcriptomics.