Galaxy |

Repository kallisto_pseudo

Name: kallisto_pseudo

Owner: iuc

Synopsis: Kallisto pseudo function from the kallisto package

Detailed description:

kallisto is a program for quantifying abundances of transcripts from RNA-Seq
data, or more generally of target sequences using high-throughput sequencing
reads. It is based on the novel idea of pseudoalignment for rapidly
determining the compatibility of reads with targets, without the need for
alignment.

Content homepage: https://pachterlab.github.io/kallisto/

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/kallisto/

Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/kallisto_pseudo/1c75aa5de15e

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/kallisto_pseudo

Type: unrestricted

Revision: 2:1c75aa5de15e

This revision can be installed: True

Times cloned / installed: 1196

Contents of this repository

Name	Description	Version	Minimum Galaxy Version
Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Kallisto pseudo View tool metadata	- run pseudoalignment on RNA-Seq transcripts	0.43.1.1	16.01