Repository package_stacks_1_32
Name: package_stacks_1_32
Owner: avowinkel
Synopsis: Contains a tool dependency definition that downloads and compiles version 1.32 of Stacks
Stacks is a software pipeline for building loci from short-read sequences, such as those generated on the Illumina platform. Stacks was developed to work with restriction enzyme-based data, such as RAD-seq, for the purpose of building genetic maps and conducting population genomics and phylogeography.
Repository-Maintainer: Alexander Vowinkel
Repository-Development: https://github.com/kaktus42/galaxytools
Content homepage: http://catchenlab.life.illinois.edu/stacks
Development repository: https://github.com/kaktus42/galaxytools
Link to this repository: https://toolshed.g2.bx.psu.edu/view/avowinkel/package_stacks_1_32/1e53d7d44ed6
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/avowinkel/package_stacks_1_32
Type: tool_dependency_definition
Revision: 0:1e53d7d44ed6
This revision can be installed: True
Times cloned / installed: 175
Dependencies of this repository

Repository dependencies - installation of these additional repositories is required
Repository package_samtools_0_1_19 revision c9bd782f5342 owned by iuc (prior install required)
Repository package_sparsehash_2_0_2 revision d08a7bffb2ee owned by iuc (prior install required)

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
samtools 0.1.19 package
sparsehash 2.0.2 package
stacks 1.32 package

Categories
Tool Dependency Packages - Repositories that contain third-party tool dependency package installation definitions