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Repository freyja_variants
Name: freyja_variants
Owner: iuc
Synopsis: Wrapper for the Freyja suite: Freyja: Call variants
Freyja is a tool to recover relative lineage abundances from mixed SARS-CoV-2 samples from a sequencing dataset (BAM aligned to the Hu-1 reference).
Content homepage: https://github.com/andersen-lab/Freyja
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/freyja
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/freyja_variants/1f467ed22412
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/freyja_variants
Type: unrestricted
Revision: 1:1f467ed22412
This revision can be installed: True
Times cloned / installed: 150

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
and get sequencing depth information 1.4.4+galaxy0 21.01

Categories
Metagenomics - Tools enabling the study of metagenomes
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis