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Repository dram_merge_annotations

Name: dram_merge_annotations

Owner: iuc

Synopsis: Wrapper for DRAM: DRAM merge multiple annotations

Detailed description:

DRAM (Distilled and Refined Annotation of Metabolism) is a tool for annotating metagenomic assembled genomes
and VirSorter identified viral contigs. DRAM annotates MAGs and viral contigs using UniRef90, PFAM, dbCAN,
RefSeq viral, VOGDB and the MEROPS peptidase database as well as custom user databases. DRAM is run in two
stages. First an annotation step to assign database identifiers to genes and then a distill step to curate
these annotations into useful functional categories. Additionally, viral contigs are further analyzed to
identify potential AMGs. This is done via assigning an auxiliary score and flags representing the confidence
that a gene is both metabolic and viral.

Content homepage: https://github.com/WrightonLabCSU/DRAM

Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/dram

Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/dram_merge_annotations/2675f8d7b2a5

Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/dram_merge_annotations

Type: unrestricted

Revision: 0:2675f8d7b2a5

This revision can be installed: True

Times cloned / installed: 134