Repository data_manager_build_kma_index
Name: data_manager_build_kma_index
Owner: iuc
Synopsis: Data Manager for building KMA indexes
KMA is mapping a method designed to map raw reads directly against redundant databases, in an
ultra-fast manner using seed and extend. KMA is particulary good at aligning high quality reads
against highly redundant databases, where unique matches often does not exist. It works for
long low quality reads as well, such as those from Nanopore. Non-unique matches are resolved using
the "ConClave" sorting scheme, and a consensus sequence are outputted in addition to other common
attributes, based on our users demands.
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_build_kma_index/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/data_manager_build_kma_index/2c532a6eee3f
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/data_manager_build_kma_index
Type: unrestricted
Revision: 2:2c532a6eee3f
This revision can be installed: True
Times cloned / installed: 291

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
kma index builder 1.2.21+galaxy0 19.01

Data Managers
Name Version Data Tables
kma_build_index 0.1.0 kma_index

Categories
Data Managers - Utilities for Managing Galaxy's built-in data cache