Repository itsx
Name: itsx
Owner: bgruening
Synopsis: ITSx is an open source software utility to extract the highly variable ITS1 and ITS2 subregions from ITS sequences.
ITSx is an open source software utility to extract the highly variable ITS1 and ITS2 subregions from ITS sequences, 
which is commonly used as a molecular barcode for e.g. fungi. As the inclusion of parts of the neighbouring, very conserved, 
ribosomal genes (SSU, 5S and LSU rRNA sequences) in the sequence identification process can lead to severely misleading results, ITSx identifies and extracts only the ITS regions themselves. 
Content homepage: https://microbiology.se/software/itsx/
Development repository: https://github.com/bgruening/galaxytools/tree/master/tools/itsx
Link to this repository: https://toolshed.g2.bx.psu.edu/view/bgruening/itsx/2cbd0d66aa08
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/itsx
Type: unrestricted
Revision: 0:2cbd0d66aa08
This revision can be installed: True
Times cloned / installed: 55

Contents of this repository

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Name Description Version Minimum Galaxy Version
identifies ITS sequences and extracts the ITS region 1.1.3+galaxy0 20.01

Categories
Metagenomics - Tools enabling the study of metagenomes