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Repository spaln
Name: spaln
Owner: iuc
Synopsis: Spaln (space-efficient spliced alignment) maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence.
Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or
protein sequences onto a whole genomic sequence in a single job. 
Content homepage: http://www.genome.ist.i.kyoto-u.ac.jp/~aln_user/spaln/
Development repository: https://github.com/ogotoh/spaln
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/spaln/2e92e1929cb1
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/spaln
Type: unrestricted
Revision: 4:2e92e1929cb1
This revision can be installed: True
Times cloned / installed: 410

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence. 2.4.9+galaxy0 16.01
Given a query species, list the spaln settings tables that exist, from closest related species to most different 2.4.9+galaxy0 16.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Genome annotation - Tools for annotating genomic information