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Repository kofamscan
Name: kofamscan
Owner: iuc
Synopsis: Gene function annotation tool based on KEGG Orthology and hidden Markov model
Gene function annotation tool based on KEGG Orthology and hidden Markov model. Kofamscan assigns K numbers to the user's sequence data by HMMER/HMMSEARCH against KOfam.
Content homepage: https://github.com/takaram/kofam_scan
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/kofamscan
Link to this repository revision: https://toolshed.g2.bx.psu.edu/view/iuc/kofamscan/2eb7932e91a3
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/kofamscan
Type: unrestricted
Revision: 4:2eb7932e91a3
This revision can be installed: True
Times cloned / installed: 199

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
gene function annotation based on KEGG orthology and HMM 1.3.0+galaxy3 22.01

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis