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Repository virhunter
Name: virhunter
Owner: iuc
Synopsis: Deep Learning method for novel virus detection in sequencing data
VirHunter is a deep learning method that uses Convolutional Neural Networks (CNNs) and a Random Forest Classifier to identify viruses in sequencing datasets. More precisely, VirHunter classifies previously assembled contigs as viral, host and bacterial (contamination).
Content homepage: https://github.com/cbib/virhunter
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/VirHunter
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/virhunter/302332b914ef
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/virhunter
Type: unrestricted
Revision: 3:302332b914ef
This revision can be installed: True
Times cloned / installed: 147

Contents of this repository

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Name Description Version Minimum Galaxy Version
Deep learning method to identify viruses in sequencing datasets 1.0.0+galaxy3 20.05

Categories
Machine Learning - Tools for machine learning