| plasmidSPAdes is a pipeline for assembling plasmid data sets. Ihas the potential to massively increase the throughput of plasmid sequencing and to provide information about plasmids in thousands of sequenced bacterial genomes by re-assembling their genomes, identifying their plasmids and supplementing the corresponding GenBank entries with the plasmid annotations |
hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/spades_plasmidspades
| Name | Description | Version | Minimum Galaxy Version |
|---|---|---|---|
| extract and assembly plasmids from WGS data | 3.15.3+galaxy2 | 20.01 | |