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Repository bigscape
Name: bigscape
Owner: iuc
Synopsis: Construct sequence similarity networks of BGCs and groups them into GCF
BiG-SCAPE (Biosynthetic Gene Similarity Clustering and Prospecting Engine)
is a software package, written in Python, that constructs sequence similarity
networks of Biosynthetic Gene Clusters (BGCs) and groups them into Gene Cluster
Families (GCFs). BiG-SCAPE does this by rapidly calculating a distance matrix
between gene clusters based on a comparison of their protein domain content,
order, copy number and sequence identity.
Content homepage: https://github.com/medema-group/BiG-SCAPE
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/bigscape/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/bigscape/3447eb0ce896
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/bigscape
Type: unrestricted
Revision: 3:3447eb0ce896
This revision can be installed: True
Times cloned / installed: 156

Contents of this repository

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Name Description Version Minimum Galaxy Version
Construct sequence similarity networks of BGCs and group them into GCF 1.1.9+galaxy2 21.05

Categories
Metagenomics - Tools enabling the study of metagenomes