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Repository data_manager_mmseqs2_database
Name: data_manager_mmseqs2_database
Owner: iuc
Synopsis: MMseqs2 is an ultra fast and sensitive sequence search and clustering suite
MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge protein and nucleotide sequence sets. 
MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows. 
The software is designed to run on multiple cores and servers and exhibits very good scalability. 
MMseqs2 can run 10000 times faster than BLAST. At 100 times its speed it achieves almost the same sensitivity. 
It can perform profile searches with the same sensitivity as PSI-BLAST at over 400 times its speed.
Content homepage: https://github.com/soedinglab/MMseqs2
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/data_managers/data_manager_mmseqs2_database
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/data_manager_mmseqs2_database/35885ec2e59b
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/data_manager_mmseqs2_database
Type: unrestricted
Revision: 2:35885ec2e59b
This revision can be installed: True
Times cloned / installed: 22

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
17-b804f+galaxy0 22.05

Data Managers
Name Version Data Tables
mmseqs2_download_databases 0.0.1 mmseqs2_databases

Categories
Data Managers - Utilities for Managing Galaxy's built-in data cache