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Repository clair3
Name: clair3
Owner: iuc
Synopsis: Symphonizing pileup and full-alignment for high-performance long-read variant calling
Clair3 is a germline small variant caller for long-reads. Clair3 makes the best of two major
method categories: pileup calling handles most variant candidates with speed, and full-alignment
tackles complicated candidates to maximize precision and recall. Clair3 runs fast and has superior
performance, especially at lower coverage. Clair3 is simple and modular for easy deployment and integration.
Content homepage: https://github.com/HKU-BAL/Clair3
Development repository: https://github.com/galaxyproject/tools-iuc/tree/master/tools/clair3
Link to this repository: https://toolshed.g2.bx.psu.edu/view/iuc/clair3/3843a30053ee
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/iuc/clair3
Type: unrestricted
Revision: 3:3843a30053ee
This revision can be installed: True
Times cloned / installed: 313

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
germline small variant caller for long-reads 1.0.8+galaxy1 23.2

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis
Variant Analysis - Tools for single nucleotide polymorphism data such as WGA