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Repository staramr
Name: staramr
Owner: nml
Synopsis: Scan genome contigs against the ResFinder, PlasmidFinder, and PointFinder antimicrobial resistance databases.
staramr - Scans genome contigs (in FASTA format) against the ResFinder, PlasmidFinder, and PointFinder databases to search for antimicrobial resistance genomes. Makes predictions of the drugs these genes give resistance to.
Content homepage: https://github.com/phac-nml/staramr
Development repository: https://github.com/phac-nml/galaxy_tools/tree/master/tools/staramr
Link to this repository: https://toolshed.g2.bx.psu.edu/view/nml/staramr/3b22de20bd4b
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/nml/staramr
Type: unrestricted
Revision: 18:3b22de20bd4b
This revision can be installed: True
Times cloned / installed: 1214

Contents of this repository

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Name Description Version Minimum Galaxy Version
Scans genome assemblies against the ResFinder, PlasmidFinder, and PointFinder databases searching for AMR genes. 0.10.0+galaxy1 16.04

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis