Repository twistdna
Name: twistdna
Owner: bgruening
Synopsis: Twist-DNA - prediction of superhelically destabilized regions
Twist-DNA, a program that predicts the locations of superhelically destabilized regions by efficiently computing base-pair and bubble opening probabilities in genomic DNA.

http://www.cbp.ens-lyon.fr/doku.php?id=developpement:productions:logiciels:twistdna
http://bioinformatics.oxfordjournals.org/content/early/2013/08/08/bioinformatics.btt415.abstract

Repository-Maintainer: Bjoern Gruening
Repository-Development: https://github.com/bgruening/galaxytools/
Link to this repository: https://toolshed.g2.bx.psu.edu/view/bgruening/twistdna/412a7b592d7b
Clone this repository: hg clone https://toolshed.g2.bx.psu.edu/repos/bgruening/twistdna
Type: unrestricted
Revision: 0:412a7b592d7b
This revision can be installed: True
Times cloned / installed: 851
Dependencies of this repository

Tool dependencies - repository tools require handling of these dependencies
Name Version Type
twistdna 1.1 package

Contents of this repository

Valid tools - click the name to preview the tool and use the pop-up menu to inspect all metadata
Name Description Version Minimum Galaxy Version
Twist-DNA allows visualization of results in standard genome browsers to compare DNA opening properties to other available datasets 0.1.0 any

Categories
Sequence Analysis - Tools for performing Protein and DNA/RNA analysis